3/4cupwhole wheat flour(I prefer white whole wheat.)
1/3cupsugar(I like coconut sugar, since it has more nutrients.)
1/4cupground flaxseed(sub: flour)
1/4cupcocoa powder
1teaspoonbaking soda
1/4teaspoonbaking powder
1/2teaspoonsalt
1/2teaspooncinnamon
2mediumbananas(ripe and mashed well; about ¾ cup per batch)
1/2cuppureed pumpkin(sub: sweet potato puree)
1/2cupavocado oil(sub: another neutral oil)
1/3cupnonfat plain Greek yogurt
1/3cuphoney
2largeeggs(beaten)
1 1/2teaspoonspure vanilla extract
2/3cupmini semi-sweet chocolate chips
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Instructions
Prep: Preheat oven to 350°F. Grease a standard muffin tin or line with silicone or paper liners. (Note: Silicone liners will increase bake time by a few minutes.)
Dry Ingredients: In a large bowl, whisk together the flours, sugar, ground flaxseed, cocoa powder, baking soda, baking powder, salt, and cinnamon.
Wet Ingredients: In a medium bowl, whisk together the mashed bananas, pumpkin purée, avocado oil, yogurt, honey, eggs, and vanilla until combined. (Tip: Blend all this in a small blender to avoid any chunks.)
Combine: Add the wet ingredients to the dry ingredients and stir just until a few streaks of dry ingredients remain. Gently fold in the chocolate chips, stirring only until all dry ingredients are incorporated. Do not overmix.
Bake: Scoop about ¼ cup of batter into each prepared muffin cup. Bake for 17-22 minutes, or until a wooden toothpick inserted into the center comes out clean.
Cool and Enjoy: Remove from the oven, carefully transfer muffins from the pan to a wire rack, and allow to cool completely.
Freezer Instructions
Freeze for Later: Bake muffins according to the directions. Place the cooled muffins on a cookie sheet lined with parchment or wax paper and flash freeze until firm. Once frozen, transfer the muffins to a freezer-safe bag or container. Store for up to 3 months.Prepare from Frozen: Thaw muffins at room temperature or in the refrigerator. For a quick option, warm them briefly in the microwave before serving.
Notes/Tips
Don’t over-mix the batter. To keep them light and fluffy, only mix the batter to the point where all the dry ingredients are combined.
Use ripe bananas for the best flavor. The bananas bring a lot of sweetness to this recipe so make sure they are nice and ripe!
Store muffins in an airtight container or ziploc bag at room temperature for 2-3 days, or in the refrigerator for 3-5 days.
We updated this recipe in January 2026. If you are looking for the original recipe, you can download it here.